Home›APIs›warwick.ac.uk

warwick.ac.uk

API for EnteroBase (https://enterobase.warwick.ac.uk) EnteroBase is a user-friendly online resource, where users can upload their own sequencing data for de novo assembly by a stream-lined pipeline. The assemblies are used for calling MLST and wgMLST patterns, allowing users to compare their st

🔑 basic 26 endpoints open_data
📄 Docs 📋 OpenAPI spec 🔬 Try in Swagger UI

No SDKs indexed for this API yet.

curl examples
Top level information about EnteroBase databases
curl \
  -u "$API_USER:$API_PASS" \
  /api/v2.0
Login endpoint, refresh your API token
curl \
  -u "$API_USER:$API_PASS" \
  /api/v2.0/login
Generic endpoint for lookup list of barcodes
curl \
  -u "$API_USER:$API_PASS" \
  /api/v2.0/lookup
Endpoints (26 total)
GET
/api/v2.0
Top level information about EnteroBase databases
GET
/api/v2.0/login
Login endpoint, refresh your API token
GET
/api/v2.0/lookup
Generic endpoint for lookup list of barcodes
GET
/api/v2.0/lookup/{barcode}
Generic endpoint for lookup of barcodes
GET
/api/v2.0/{database}/traces
Traces (sequence-reads) metadata
GET
/api/v2.0/{database}/schemes
Genotyping schemes
GET
/api/v2.0/{database}/strains
Strain metadata
GET
/api/v2.0/{database}/assemblies
Genome assemblies
GET
/api/v2.0/{database}/straindata
Strain data
GET
/api/v2.0/{database}/{scheme}/sts
ST profile data
GET
/api/v2.0/{database}/{scheme}/loci
Loci
GET
/api/v2.0/{database}/strainsversion
Strain previous metadata
Related APIs in same category
api.gov.ukapis.gurubbc.comclimate.comcore.ac.ukepa.gov
Language coverage

No SDKs yet

At a glance
Total SDKs0
Languages0
Endpoints26
Authbasic
Categories1